Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim34aQ99PP6 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.71■■□□□ 1.55
Trim34aQ99PP6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.71■■□□□ 1.55
Trim34aQ99PP6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim34aQ99PP6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim34aQ99PP6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Trim34aQ99PP6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trim34aQ99PP6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim34aQ99PP6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Trim34aQ99PP6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim34aQ99PP6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim34aQ99PP6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim34aQ99PP6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.68■■□□□ 1.54
Trim34aQ99PP6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim34aQ99PP6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Gm27801-201ENSMUST00000184174 223 ntBASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim34aQ99PP6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim34aQ99PP6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim34aQ99PP6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim34aQ99PP6 Gm13234-201ENSMUST00000120010 747 ntBASIC24.64■■□□□ 1.54
Trim34aQ99PP6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim34aQ99PP6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Trim34aQ99PP6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Trim34aQ99PP6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim34aQ99PP6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Trim34aQ99PP6 Reep4-203ENSMUST00000226563 1444 ntBASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC24.61■■□□□ 1.53
Trim34aQ99PP6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Trim34aQ99PP6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms