Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb3Q91XZ7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhb3Q91XZ7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb3Q91XZ7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb3Q91XZ7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Rps24-207ENSMUST00000224568 714 ntBASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb3Q91XZ7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb3Q91XZ7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb3Q91XZ7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb3Q91XZ7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb3Q91XZ7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb3Q91XZ7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms