Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb4Q91XZ6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb4Q91XZ6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb4Q91XZ6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb4Q91XZ6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb4Q91XZ6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb4Q91XZ6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Etf1-202ENSMUST00000180351 108 ntBASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb4Q91XZ6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb4Q91XZ6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb4Q91XZ6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb4Q91XZ6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Pcdhb4Q91XZ6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb4Q91XZ6 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms