Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TraipQ8VIG6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.28■■□□□ 1
TraipQ8VIG6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TraipQ8VIG6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
TraipQ8VIG6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TraipQ8VIG6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TraipQ8VIG6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.27■■□□□ 1
TraipQ8VIG6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TraipQ8VIG6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TraipQ8VIG6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.27■■□□□ 1
TraipQ8VIG6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.27■■□□□ 1
TraipQ8VIG6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.27■■□□□ 1
TraipQ8VIG6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TraipQ8VIG6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TraipQ8VIG6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TraipQ8VIG6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.26■□□□□ 0.99
TraipQ8VIG6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Gm42642-201ENSMUST00000200683 355 ntBASIC21.26■□□□□ 0.99
TraipQ8VIG6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TraipQ8VIG6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.25■□□□□ 0.99
TraipQ8VIG6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TraipQ8VIG6 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.25■□□□□ 0.99
TraipQ8VIG6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TraipQ8VIG6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TraipQ8VIG6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.24■□□□□ 0.99
TraipQ8VIG6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TraipQ8VIG6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TraipQ8VIG6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.23■□□□□ 0.99
TraipQ8VIG6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TraipQ8VIG6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TraipQ8VIG6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Gm27801-201ENSMUST00000184174 223 ntBASIC21.22■□□□□ 0.99
TraipQ8VIG6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TraipQ8VIG6 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.22■□□□□ 0.99
TraipQ8VIG6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TraipQ8VIG6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Gm10033-202ENSMUST00000211874 928 ntBASIC21.2■□□□□ 0.98
TraipQ8VIG6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TraipQ8VIG6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Gm26571-201ENSMUST00000181399 666 ntBASIC21.19■□□□□ 0.98
TraipQ8VIG6 Gm27405-201ENSMUST00000184201 112 ntBASIC21.19■□□□□ 0.98
TraipQ8VIG6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TraipQ8VIG6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TraipQ8VIG6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.19■□□□□ 0.98
TraipQ8VIG6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Gm7291-201ENSMUST00000199147 382 ntBASIC21.18■□□□□ 0.98
TraipQ8VIG6 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.18■□□□□ 0.98
TraipQ8VIG6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TraipQ8VIG6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TraipQ8VIG6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms