Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab40bQ8VHP8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab40bQ8VHP8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab40bQ8VHP8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab40bQ8VHP8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rab40bQ8VHP8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rab40bQ8VHP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rab40bQ8VHP8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rab40bQ8VHP8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rab40bQ8VHP8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40bQ8VHP8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40bQ8VHP8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rab40bQ8VHP8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rab40bQ8VHP8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rab40bQ8VHP8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms