Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Cap2-205ENSMUST00000225824 1634 ntBASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Golph3-205ENSMUST00000228671 2842 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms