Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpa1Q8VEE4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpa1Q8VEE4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Rpa1Q8VEE4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpa1Q8VEE4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpa1Q8VEE4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpa1Q8VEE4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Cap2-205ENSMUST00000225824 1634 ntBASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpa1Q8VEE4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpa1Q8VEE4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rpa1Q8VEE4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpa1Q8VEE4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpa1Q8VEE4 Golph3-205ENSMUST00000228671 2842 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms