Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdt1Q8R4E9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdt1Q8R4E9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdt1Q8R4E9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdt1Q8R4E9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdt1Q8R4E9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
Cdt1Q8R4E9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdt1Q8R4E9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdt1Q8R4E9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms