Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Treml1Q8K558 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Treml1Q8K558 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Treml1Q8K558 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.63■□□□□ 0.73
Treml1Q8K558 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Treml1Q8K558 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.63■□□□□ 0.73
Treml1Q8K558 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.63■□□□□ 0.73
Treml1Q8K558 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml1Q8K558 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Treml1Q8K558 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.62■□□□□ 0.73
Treml1Q8K558 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.62■□□□□ 0.73
Treml1Q8K558 Gm45417-201ENSMUST00000209533 758 ntBASIC19.62■□□□□ 0.73
Treml1Q8K558 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.62■□□□□ 0.73
Treml1Q8K558 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Treml1Q8K558 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Treml1Q8K558 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml1Q8K558 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Treml1Q8K558 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.61■□□□□ 0.73
Treml1Q8K558 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml1Q8K558 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Treml1Q8K558 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.6■□□□□ 0.73
Treml1Q8K558 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.6■□□□□ 0.73
Treml1Q8K558 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.6■□□□□ 0.73
Treml1Q8K558 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml1Q8K558 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.59■□□□□ 0.73
Treml1Q8K558 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Treml1Q8K558 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Mir6236-201ENSMUST00000184437 123 ntBASIC19.59■□□□□ 0.73
Treml1Q8K558 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml1Q8K558 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.59■□□□□ 0.73
Treml1Q8K558 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Treml1Q8K558 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Treml1Q8K558 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Treml1Q8K558 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Treml1Q8K558 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml1Q8K558 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml1Q8K558 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Treml1Q8K558 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Treml1Q8K558 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Treml1Q8K558 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml1Q8K558 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml1Q8K558 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml1Q8K558 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml1Q8K558 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml1Q8K558 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml1Q8K558 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Treml1Q8K558 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Treml1Q8K558 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.56■□□□□ 0.72
Treml1Q8K558 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.56■□□□□ 0.72
Treml1Q8K558 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.56■□□□□ 0.72
Treml1Q8K558 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml1Q8K558 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Treml1Q8K558 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Treml1Q8K558 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.55■□□□□ 0.72
Treml1Q8K558 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Treml1Q8K558 Gm12251-201ENSMUST00000117893 792 ntBASIC19.55■□□□□ 0.72
Treml1Q8K558 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Treml1Q8K558 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms