Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alms1Q8K4E0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Alms1Q8K4E0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.61■□□□□ 0.73
Alms1Q8K4E0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Alms1Q8K4E0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Alms1Q8K4E0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Alms1Q8K4E0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alms1Q8K4E0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Alms1Q8K4E0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.58■□□□□ 0.73
Alms1Q8K4E0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Reep4-203ENSMUST00000226563 1444 ntBASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Gm10602-201ENSMUST00000098239 609 ntBASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alms1Q8K4E0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Gm12933-201ENSMUST00000120203 872 ntBASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alms1Q8K4E0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.56■□□□□ 0.72
Alms1Q8K4E0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alms1Q8K4E0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alms1Q8K4E0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alms1Q8K4E0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms