Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nckap1lQ8K1X4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nckap1lQ8K1X4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Gm7143-201ENSMUST00000222811 859 ntBASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nckap1lQ8K1X4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nckap1lQ8K1X4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Rps24-207ENSMUST00000224568 714 ntBASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nckap1lQ8K1X4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nckap1lQ8K1X4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Nckap1lQ8K1X4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.27■□□□□ 0.67
Nckap1lQ8K1X4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Gm14117-201ENSMUST00000122417 843 ntBASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Gm45102-201ENSMUST00000207427 857 ntBASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nckap1lQ8K1X4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nckap1lQ8K1X4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nckap1lQ8K1X4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nckap1lQ8K1X4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Nckap1lQ8K1X4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms