Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc5Q8CG46 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
Smc5Q8CG46 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Smc5Q8CG46 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Smc5Q8CG46 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Smc5Q8CG46 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc5Q8CG46 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc5Q8CG46 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Smc5Q8CG46 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.74■■□□□ 1.55
Smc5Q8CG46 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Smc5Q8CG46 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc5Q8CG46 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Smc5Q8CG46 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc5Q8CG46 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Smc5Q8CG46 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Smc5Q8CG46 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.73■■□□□ 1.55
Smc5Q8CG46 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
Smc5Q8CG46 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc5Q8CG46 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Smc5Q8CG46 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc5Q8CG46 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.71■■□□□ 1.55
Smc5Q8CG46 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smc5Q8CG46 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Smc5Q8CG46 Mir6236-201ENSMUST00000184437 123 ntBASIC24.7■■□□□ 1.54
Smc5Q8CG46 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc5Q8CG46 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Smc5Q8CG46 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Smc5Q8CG46 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Smc5Q8CG46 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Smc5Q8CG46 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.68■■□□□ 1.54
Smc5Q8CG46 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Smc5Q8CG46 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Gm43530-201ENSMUST00000195920 274 ntBASIC24.66■■□□□ 1.54
Smc5Q8CG46 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.66■■□□□ 1.54
Smc5Q8CG46 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Smc5Q8CG46 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smc5Q8CG46 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smc5Q8CG46 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Smc5Q8CG46 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smc5Q8CG46 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Smc5Q8CG46 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Smc5Q8CG46 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
Smc5Q8CG46 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC24.64■■□□□ 1.54
Smc5Q8CG46 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Smc5Q8CG46 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Smc5Q8CG46 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 222.1 ms