Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc49a3Q8CE47 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc49a3Q8CE47 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Slc49a3Q8CE47 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Slc49a3Q8CE47 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc49a3Q8CE47 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc49a3Q8CE47 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.23■□□□□ 0.51
Slc49a3Q8CE47 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc49a3Q8CE47 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc49a3Q8CE47 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc49a3Q8CE47 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc49a3Q8CE47 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Gm14523-201ENSMUST00000117260 558 ntBASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc49a3Q8CE47 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc49a3Q8CE47 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc49a3Q8CE47 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc49a3Q8CE47 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc49a3Q8CE47 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc49a3Q8CE47 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms