Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4Q8BQZ5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Gm13241-201ENSMUST00000094493 780 ntBASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.24■□□□□ 0.67
Cpsf4Q8BQZ5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Gm9870-201ENSMUST00000063874 645 ntBASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpsf4Q8BQZ5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Golgb1-201ENSMUST00000023534 498 ntBASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4Q8BQZ5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4Q8BQZ5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf4Q8BQZ5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.19■□□□□ 0.66
Cpsf4Q8BQZ5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4Q8BQZ5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms