Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Zcchc3Q8BPK2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Zcchc3Q8BPK2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Zcchc3Q8BPK2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Mir6236-201ENSMUST00000184437 123 ntBASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Zcchc3Q8BPK2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc3Q8BPK2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc3Q8BPK2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Zcchc3Q8BPK2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Zcchc3Q8BPK2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc3Q8BPK2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc3Q8BPK2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc3Q8BPK2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms