Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp1Q8BJQ2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Gm10849-201ENSMUST00000100397 618 ntBASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.16■□□□□ 0.98
Usp1Q8BJQ2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Gm29257-201ENSMUST00000186115 639 ntBASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp1Q8BJQ2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp1Q8BJQ2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp1Q8BJQ2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp1Q8BJQ2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Gm26571-201ENSMUST00000181399 666 ntBASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp1Q8BJQ2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Gm11421-201ENSMUST00000122124 294 ntBASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp1Q8BJQ2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp1Q8BJQ2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp1Q8BJQ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp1Q8BJQ2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp1Q8BJQ2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Gm18671-201ENSMUST00000214826 683 ntBASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp1Q8BJQ2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp1Q8BJQ2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms