Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Atpaf1Q811I0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.22■□□□□ 0.19
Atpaf1Q811I0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.22■□□□□ 0.19
Atpaf1Q811I0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.22■□□□□ 0.19
Atpaf1Q811I0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Atpaf1Q811I0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Atpaf1Q811I0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atpaf1Q811I0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Atpaf1Q811I0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.21■□□□□ 0.18
Atpaf1Q811I0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Atpaf1Q811I0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atpaf1Q811I0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atpaf1Q811I0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atpaf1Q811I0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms