Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prdm4Q80V63 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prdm4Q80V63 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
Prdm4Q80V63 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prdm4Q80V63 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.58■□□□□ 0.89
Prdm4Q80V63 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.58■□□□□ 0.88
Prdm4Q80V63 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prdm4Q80V63 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.56■□□□□ 0.88
Prdm4Q80V63 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Gm5921-201ENSMUST00000075898 882 ntBASIC20.56■□□□□ 0.88
Prdm4Q80V63 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prdm4Q80V63 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.55■□□□□ 0.88
Prdm4Q80V63 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prdm4Q80V63 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Gm45444-201ENSMUST00000211394 898 ntBASIC20.54■□□□□ 0.88
Prdm4Q80V63 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.54■□□□□ 0.88
Prdm4Q80V63 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prdm4Q80V63 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prdm4Q80V63 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Gm5812-201ENSMUST00000061073 957 ntBASIC20.52■□□□□ 0.88
Prdm4Q80V63 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prdm4Q80V63 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prdm4Q80V63 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Prdm4Q80V63 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms