Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RfflQ6ZQM0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RfflQ6ZQM0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RfflQ6ZQM0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RfflQ6ZQM0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RfflQ6ZQM0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Gm11687-201ENSMUST00000118911 886 ntBASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RfflQ6ZQM0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RfflQ6ZQM0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.26■□□□□ 0.67
RfflQ6ZQM0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RfflQ6ZQM0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RfflQ6ZQM0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RfflQ6ZQM0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RfflQ6ZQM0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RfflQ6ZQM0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RfflQ6ZQM0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RfflQ6ZQM0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RfflQ6ZQM0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RfflQ6ZQM0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RfflQ6ZQM0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms