Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Krt42Q6IFX2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Krt42Q6IFX2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Krt42Q6IFX2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krt42Q6IFX2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krt42Q6IFX2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Krt42Q6IFX2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krt42Q6IFX2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Krt42Q6IFX2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krt42Q6IFX2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Krt42Q6IFX2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Gm14523-201ENSMUST00000117260 558 ntBASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Krt42Q6IFX2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krt42Q6IFX2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Krt42Q6IFX2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt42Q6IFX2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Krt42Q6IFX2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Krt42Q6IFX2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt42Q6IFX2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krt42Q6IFX2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms