Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.08■□□□□ 0.64
Sdc3Q64519 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdc3Q64519 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sdc3Q64519 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sdc3Q64519 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sdc3Q64519 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.07■□□□□ 0.64
Sdc3Q64519 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdc3Q64519 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.07■□□□□ 0.64
Sdc3Q64519 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.06■□□□□ 0.64
Sdc3Q64519 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Sdc3Q64519 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.06■□□□□ 0.64
Sdc3Q64519 Gm43017-201ENSMUST00000198296 752 ntBASIC19.06■□□□□ 0.64
Sdc3Q64519 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sdc3Q64519 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdc3Q64519 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.05■□□□□ 0.64
Sdc3Q64519 Gm12251-201ENSMUST00000117893 792 ntBASIC19.05■□□□□ 0.64
Sdc3Q64519 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.05■□□□□ 0.64
Sdc3Q64519 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.05■□□□□ 0.64
Sdc3Q64519 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc3Q64519 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdc3Q64519 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.04■□□□□ 0.64
Sdc3Q64519 Gm8493-201ENSMUST00000196881 489 ntBASIC19.04■□□□□ 0.64
Sdc3Q64519 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Sdc3Q64519 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdc3Q64519 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.03■□□□□ 0.64
Sdc3Q64519 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.03■□□□□ 0.64
Sdc3Q64519 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.03■□□□□ 0.64
Sdc3Q64519 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.03■□□□□ 0.64
Sdc3Q64519 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Sdc3Q64519 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdc3Q64519 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc3Q64519 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc3Q64519 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc3Q64519 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdc3Q64519 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sdc3Q64519 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Sdc3Q64519 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.01■□□□□ 0.63
Sdc3Q64519 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Sdc3Q64519 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
Sdc3Q64519 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Sdc3Q64519 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdc3Q64519 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Sdc3Q64519 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
Sdc3Q64519 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sdc3Q64519 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Sdc3Q64519 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdc3Q64519 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19■□□□□ 0.63
Sdc3Q64519 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.99■□□□□ 0.63
Sdc3Q64519 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sdc3Q64519 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.99■□□□□ 0.63
Sdc3Q64519 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdc3Q64519 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms