Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sptbn1Q62261 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.03■□□□□ 0.32
Sptbn1Q62261 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn1Q62261 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sptbn1Q62261 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sptbn1Q62261 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.02■□□□□ 0.32
Sptbn1Q62261 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.02■□□□□ 0.32
Sptbn1Q62261 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.02■□□□□ 0.31
Sptbn1Q62261 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn1Q62261 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn1Q62261 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn1Q62261 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.01■□□□□ 0.31
Sptbn1Q62261 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Gm13168-201ENSMUST00000121771 632 ntBASIC17.01■□□□□ 0.31
Sptbn1Q62261 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn1Q62261 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17■□□□□ 0.31
Sptbn1Q62261 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17■□□□□ 0.31
Sptbn1Q62261 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17■□□□□ 0.31
Sptbn1Q62261 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sptbn1Q62261 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17■□□□□ 0.31
Sptbn1Q62261 Gm37856-201ENSMUST00000191634 999 ntBASIC17■□□□□ 0.31
Sptbn1Q62261 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sptbn1Q62261 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sptbn1Q62261 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sptbn1Q62261 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sptbn1Q62261 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.99■□□□□ 0.31
Sptbn1Q62261 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.99■□□□□ 0.31
Sptbn1Q62261 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sptbn1Q62261 Gm20049-201ENSMUST00000219950 730 ntBASIC16.99■□□□□ 0.31
Sptbn1Q62261 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.98■□□□□ 0.31
Sptbn1Q62261 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sptbn1Q62261 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptbn1Q62261 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.97■□□□□ 0.31
Sptbn1Q62261 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sptbn1Q62261 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sptbn1Q62261 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sptbn1Q62261 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.96■□□□□ 0.31
Sptbn1Q62261 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.96■□□□□ 0.31
Sptbn1Q62261 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms