Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Six1Q62231 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six1Q62231 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six1Q62231 Gm43530-201ENSMUST00000195920 274 ntBASIC20.54■□□□□ 0.88
Six1Q62231 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six1Q62231 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.53■□□□□ 0.88
Six1Q62231 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Six1Q62231 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six1Q62231 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Six1Q62231 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.53■□□□□ 0.88
Six1Q62231 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.53■□□□□ 0.88
Six1Q62231 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Six1Q62231 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six1Q62231 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Six1Q62231 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six1Q62231 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Six1Q62231 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six1Q62231 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Six1Q62231 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six1Q62231 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six1Q62231 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six1Q62231 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six1Q62231 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.52■□□□□ 0.88
Six1Q62231 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Six1Q62231 Mir6236-201ENSMUST00000184437 123 ntBASIC20.52■□□□□ 0.88
Six1Q62231 Gm9870-201ENSMUST00000063874 645 ntBASIC20.52■□□□□ 0.88
Six1Q62231 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.52■□□□□ 0.88
Six1Q62231 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six1Q62231 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Six1Q62231 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.52■□□□□ 0.87
Six1Q62231 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six1Q62231 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six1Q62231 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Six1Q62231 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Six1Q62231 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Six1Q62231 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Six1Q62231 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.51■□□□□ 0.87
Six1Q62231 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Six1Q62231 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six1Q62231 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six1Q62231 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six1Q62231 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.5■□□□□ 0.87
Six1Q62231 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.5■□□□□ 0.87
Six1Q62231 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six1Q62231 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six1Q62231 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six1Q62231 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Six1Q62231 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Six1Q62231 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Six1Q62231 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Six1Q62231 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six1Q62231 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six1Q62231 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Six1Q62231 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.48■□□□□ 0.87
Six1Q62231 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six1Q62231 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six1Q62231 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Six1Q62231 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Six1Q62231 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six1Q62231 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six1Q62231 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Six1Q62231 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.47■□□□□ 0.87
Six1Q62231 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six1Q62231 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six1Q62231 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six1Q62231 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Six1Q62231 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six1Q62231 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.46■□□□□ 0.87
Six1Q62231 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six1Q62231 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six1Q62231 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six1Q62231 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Six1Q62231 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Six1Q62231 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Six1Q62231 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.45■□□□□ 0.86
Six1Q62231 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Six1Q62231 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Six1Q62231 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six1Q62231 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six1Q62231 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six1Q62231 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Six1Q62231 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six1Q62231 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.44■□□□□ 0.86
Six1Q62231 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six1Q62231 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms