Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SspnQ62147 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SspnQ62147 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SspnQ62147 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SspnQ62147 Gm15546-201ENSMUST00000122095 826 ntBASIC16.58■□□□□ 0.24
SspnQ62147 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SspnQ62147 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.58■□□□□ 0.24
SspnQ62147 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SspnQ62147 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SspnQ62147 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.58■□□□□ 0.24
SspnQ62147 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SspnQ62147 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SspnQ62147 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SspnQ62147 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
SspnQ62147 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SspnQ62147 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.57■□□□□ 0.24
SspnQ62147 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.57■□□□□ 0.24
SspnQ62147 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SspnQ62147 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.56■□□□□ 0.24
SspnQ62147 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Gm7143-201ENSMUST00000222811 859 ntBASIC16.56■□□□□ 0.24
SspnQ62147 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SspnQ62147 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.56■□□□□ 0.24
SspnQ62147 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SspnQ62147 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.55■□□□□ 0.24
SspnQ62147 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SspnQ62147 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.54■□□□□ 0.24
SspnQ62147 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Gm7417-201ENSMUST00000192950 473 ntBASIC16.54■□□□□ 0.24
SspnQ62147 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SspnQ62147 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.54■□□□□ 0.24
SspnQ62147 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.53■□□□□ 0.24
SspnQ62147 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.53■□□□□ 0.24
SspnQ62147 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SspnQ62147 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SspnQ62147 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SspnQ62147 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SspnQ62147 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SspnQ62147 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SspnQ62147 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SspnQ62147 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SspnQ62147 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.52■□□□□ 0.24
SspnQ62147 Etf1-202ENSMUST00000180351 108 ntBASIC16.52■□□□□ 0.24
SspnQ62147 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.52■□□□□ 0.23
SspnQ62147 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SspnQ62147 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SspnQ62147 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms