Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hif1aQ61221 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hif1aQ61221 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hif1aQ61221 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hif1aQ61221 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hif1aQ61221 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.06■□□□□ 0.8
Hif1aQ61221 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
Hif1aQ61221 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hif1aQ61221 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
Hif1aQ61221 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hif1aQ61221 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hif1aQ61221 Gm10399-202ENSMUST00000202768 748 ntBASIC20.05■□□□□ 0.8
Hif1aQ61221 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hif1aQ61221 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hif1aQ61221 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hif1aQ61221 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.04■□□□□ 0.8
Hif1aQ61221 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hif1aQ61221 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hif1aQ61221 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hif1aQ61221 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hif1aQ61221 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hif1aQ61221 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hif1aQ61221 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.03■□□□□ 0.8
Hif1aQ61221 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hif1aQ61221 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Hif1aQ61221 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Hif1aQ61221 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hif1aQ61221 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.02■□□□□ 0.8
Hif1aQ61221 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hif1aQ61221 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.02■□□□□ 0.8
Hif1aQ61221 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hif1aQ61221 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hif1aQ61221 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hif1aQ61221 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hif1aQ61221 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hif1aQ61221 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.01■□□□□ 0.79
Hif1aQ61221 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Hif1aQ61221 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hif1aQ61221 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hif1aQ61221 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hif1aQ61221 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hif1aQ61221 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Hif1aQ61221 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.99■□□□□ 0.79
Hif1aQ61221 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hif1aQ61221 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.99■□□□□ 0.79
Hif1aQ61221 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hif1aQ61221 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.99■□□□□ 0.79
Hif1aQ61221 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hif1aQ61221 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Hif1aQ61221 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hif1aQ61221 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hif1aQ61221 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hif1aQ61221 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.97■□□□□ 0.79
Hif1aQ61221 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hif1aQ61221 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms