Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.03■□□□□ 0.64
Xrcc1Q60596 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Xrcc1Q60596 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Mir7075-201ENSMUST00000184187 82 ntBASIC19.02■□□□□ 0.64
Xrcc1Q60596 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.02■□□□□ 0.64
Xrcc1Q60596 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.02■□□□□ 0.64
Xrcc1Q60596 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Xrcc1Q60596 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Xrcc1Q60596 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Xrcc1Q60596 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Xrcc1Q60596 Gm43006-201ENSMUST00000197702 1602 ntBASIC19■□□□□ 0.63
Xrcc1Q60596 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19■□□□□ 0.63
Xrcc1Q60596 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Xrcc1Q60596 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Xrcc1Q60596 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.99■□□□□ 0.63
Xrcc1Q60596 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Gm6139-201ENSMUST00000079261 882 ntBASIC18.99■□□□□ 0.63
Xrcc1Q60596 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Xrcc1Q60596 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc1Q60596 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Xrcc1Q60596 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.98■□□□□ 0.63
Xrcc1Q60596 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc1Q60596 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc1Q60596 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Xrcc1Q60596 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.98■□□□□ 0.63
Xrcc1Q60596 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.98■□□□□ 0.63
Xrcc1Q60596 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Gm15039-201ENSMUST00000118914 875 ntBASIC18.97■□□□□ 0.63
Xrcc1Q60596 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.97■□□□□ 0.63
Xrcc1Q60596 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.96■□□□□ 0.63
Xrcc1Q60596 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Gm12251-201ENSMUST00000117893 792 ntBASIC18.96■□□□□ 0.63
Xrcc1Q60596 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.96■□□□□ 0.63
Xrcc1Q60596 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Spcs1-204ENSMUST00000226782 949 ntBASIC18.96■□□□□ 0.63
Xrcc1Q60596 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.96■□□□□ 0.63
Xrcc1Q60596 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Xrcc1Q60596 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc1Q60596 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.95■□□□□ 0.62
Xrcc1Q60596 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms