Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rc3h1Q4VGL6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rc3h1Q4VGL6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rc3h1Q4VGL6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rc3h1Q4VGL6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rc3h1Q4VGL6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h1Q4VGL6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h1Q4VGL6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.13■■□□□ 1.29
Rc3h1Q4VGL6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rc3h1Q4VGL6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rc3h1Q4VGL6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Rc3h1Q4VGL6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Gm5874-201ENSMUST00000096101 508 ntBASIC23.1■■□□□ 1.29
Rc3h1Q4VGL6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.09■■□□□ 1.29
Rc3h1Q4VGL6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rc3h1Q4VGL6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.07■■□□□ 1.28
Rc3h1Q4VGL6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rc3h1Q4VGL6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.06■■□□□ 1.28
Rc3h1Q4VGL6 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.06■■□□□ 1.28
Rc3h1Q4VGL6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rc3h1Q4VGL6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rc3h1Q4VGL6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Rc3h1Q4VGL6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Gm11421-201ENSMUST00000122124 294 ntBASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rc3h1Q4VGL6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.03■■□□□ 1.28
Rc3h1Q4VGL6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms