Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cul4aQ3TCH7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.97■□□□□ 0.95
Cul4aQ3TCH7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cul4aQ3TCH7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cul4aQ3TCH7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Mir6236-201ENSMUST00000184437 123 ntBASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Gm43530-201ENSMUST00000195920 274 ntBASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cul4aQ3TCH7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cul4aQ3TCH7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Gm9870-201ENSMUST00000063874 645 ntBASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cul4aQ3TCH7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cul4aQ3TCH7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cul4aQ3TCH7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cul4aQ3TCH7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cul4aQ3TCH7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cul4aQ3TCH7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.89■□□□□ 0.93
Cul4aQ3TCH7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cul4aQ3TCH7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cul4aQ3TCH7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cul4aQ3TCH7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cul4aQ3TCH7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.88■□□□□ 0.93
Cul4aQ3TCH7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cul4aQ3TCH7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.87■□□□□ 0.93
Cul4aQ3TCH7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms