Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhej1Q3KNJ2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nhej1Q3KNJ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nhej1Q3KNJ2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nhej1Q3KNJ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhej1Q3KNJ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Nhej1Q3KNJ2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nhej1Q3KNJ2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nhej1Q3KNJ2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nhej1Q3KNJ2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nhej1Q3KNJ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhej1Q3KNJ2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nhej1Q3KNJ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.14■□□□□ 0.98
Nhej1Q3KNJ2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Nhej1Q3KNJ2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nhej1Q3KNJ2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nhej1Q3KNJ2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms