Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcbP82349 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SgcbP82349 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SgcbP82349 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SgcbP82349 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.74■□□□□ 0.43
SgcbP82349 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SgcbP82349 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcbP82349 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SgcbP82349 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcbP82349 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.73■□□□□ 0.43
SgcbP82349 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcbP82349 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
SgcbP82349 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SgcbP82349 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SgcbP82349 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SgcbP82349 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SgcbP82349 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.72■□□□□ 0.43
SgcbP82349 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcbP82349 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.71■□□□□ 0.43
SgcbP82349 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Mir7075-201ENSMUST00000184187 82 ntBASIC17.71■□□□□ 0.43
SgcbP82349 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SgcbP82349 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcbP82349 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SgcbP82349 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SgcbP82349 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SgcbP82349 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SgcbP82349 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SgcbP82349 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.7■□□□□ 0.42
SgcbP82349 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcbP82349 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcbP82349 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SgcbP82349 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SgcbP82349 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcbP82349 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.69■□□□□ 0.42
SgcbP82349 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SgcbP82349 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SgcbP82349 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SgcbP82349 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.69■□□□□ 0.42
SgcbP82349 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SgcbP82349 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SgcbP82349 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SgcbP82349 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SgcbP82349 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
SgcbP82349 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SgcbP82349 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SgcbP82349 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcbP82349 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms