Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.09□□□□□ -0.15
Cks1bP61025 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cks1bP61025 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cks1bP61025 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.08□□□□□ -0.15
Cks1bP61025 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cks1bP61025 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Cks1bP61025 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.08□□□□□ -0.16
Cks1bP61025 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cks1bP61025 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.08□□□□□ -0.16
Cks1bP61025 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.08□□□□□ -0.16
Cks1bP61025 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cks1bP61025 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.07□□□□□ -0.16
Cks1bP61025 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Gm11687-201ENSMUST00000118911 886 ntBASIC14.07□□□□□ -0.16
Cks1bP61025 Scarna2-201ENSMUST00000157560 414 ntBASIC14.07□□□□□ -0.16
Cks1bP61025 Gm16437-201ENSMUST00000025669 507 ntBASIC14.07□□□□□ -0.16
Cks1bP61025 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cks1bP61025 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cks1bP61025 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cks1bP61025 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.07□□□□□ -0.16
Cks1bP61025 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cks1bP61025 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.06□□□□□ -0.16
Cks1bP61025 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cks1bP61025 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.06□□□□□ -0.16
Cks1bP61025 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cks1bP61025 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.05□□□□□ -0.16
Cks1bP61025 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.05□□□□□ -0.16
Cks1bP61025 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cks1bP61025 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cks1bP61025 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cks1bP61025 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.05□□□□□ -0.16
Cks1bP61025 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.05□□□□□ -0.16
Cks1bP61025 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cks1bP61025 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.04□□□□□ -0.16
Cks1bP61025 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cks1bP61025 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cks1bP61025 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cks1bP61025 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cks1bP61025 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms