Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cpne2P59108 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpne2P59108 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpne2P59108 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpne2P59108 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.66■□□□□ 0.26
Cpne2P59108 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Cpne2P59108 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cpne2P59108 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpne2P59108 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cpne2P59108 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.65■□□□□ 0.26
Cpne2P59108 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.65■□□□□ 0.26
Cpne2P59108 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpne2P59108 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cpne2P59108 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.64■□□□□ 0.25
Cpne2P59108 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cpne2P59108 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cpne2P59108 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cpne2P59108 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Cpne2P59108 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne2P59108 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.63■□□□□ 0.25
Cpne2P59108 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cpne2P59108 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne2P59108 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.63■□□□□ 0.25
Cpne2P59108 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cpne2P59108 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpne2P59108 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cpne2P59108 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpne2P59108 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cpne2P59108 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.62■□□□□ 0.25
Cpne2P59108 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cpne2P59108 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.62■□□□□ 0.25
Cpne2P59108 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cpne2P59108 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpne2P59108 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cpne2P59108 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cpne2P59108 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpne2P59108 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms