Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.11■□□□□ 0.65
Sox18P43680 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Sox18P43680 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sox18P43680 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.11■□□□□ 0.65
Sox18P43680 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox18P43680 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sox18P43680 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sox18P43680 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sox18P43680 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sox18P43680 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sox18P43680 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox18P43680 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox18P43680 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox18P43680 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.09■□□□□ 0.65
Sox18P43680 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sox18P43680 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox18P43680 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sox18P43680 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox18P43680 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox18P43680 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Sox18P43680 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Sox18P43680 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sox18P43680 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.08■□□□□ 0.64
Sox18P43680 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.08■□□□□ 0.64
Sox18P43680 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.08■□□□□ 0.64
Sox18P43680 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox18P43680 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox18P43680 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox18P43680 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox18P43680 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.07■□□□□ 0.64
Sox18P43680 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Sox18P43680 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox18P43680 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox18P43680 Gm12527-201ENSMUST00000117967 564 ntBASIC19.07■□□□□ 0.64
Sox18P43680 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.07■□□□□ 0.64
Sox18P43680 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox18P43680 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.07■□□□□ 0.64
Sox18P43680 Gm7977-201ENSMUST00000193787 748 ntBASIC19.07■□□□□ 0.64
Sox18P43680 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Sox18P43680 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sox18P43680 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Sox18P43680 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox18P43680 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sox18P43680 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Sox18P43680 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Sox18P43680 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.06■□□□□ 0.64
Sox18P43680 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.06■□□□□ 0.64
Sox18P43680 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.06■□□□□ 0.64
Sox18P43680 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Gm7514-201ENSMUST00000209475 934 ntBASIC19.06■□□□□ 0.64
Sox18P43680 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.06■□□□□ 0.64
Sox18P43680 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sox18P43680 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Sox18P43680 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Reep4-203ENSMUST00000226563 1444 ntBASIC19.06■□□□□ 0.64
Sox18P43680 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox18P43680 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.05■□□□□ 0.64
Sox18P43680 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.05■□□□□ 0.64
Sox18P43680 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.05■□□□□ 0.64
Sox18P43680 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sox18P43680 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox18P43680 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox18P43680 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox18P43680 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.04■□□□□ 0.64
Sox18P43680 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.04■□□□□ 0.64
Sox18P43680 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox18P43680 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms