Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cd28P31041 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cd28P31041 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Cd28P31041 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd28P31041 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cd28P31041 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cd28P31041 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd28P31041 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd28P31041 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cd28P31041 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.51■□□□□ 0.39
Cd28P31041 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cd28P31041 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.51■□□□□ 0.39
Cd28P31041 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.51■□□□□ 0.39
Cd28P31041 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd28P31041 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.51■□□□□ 0.39
Cd28P31041 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd28P31041 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd28P31041 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd28P31041 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.5■□□□□ 0.39
Cd28P31041 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.5■□□□□ 0.39
Cd28P31041 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd28P31041 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd28P31041 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Cd28P31041 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.49■□□□□ 0.39
Cd28P31041 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cd28P31041 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cd28P31041 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd28P31041 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd28P31041 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd28P31041 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd28P31041 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd28P31041 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd28P31041 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd28P31041 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cd28P31041 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd28P31041 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cd28P31041 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cd28P31041 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd28P31041 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cd28P31041 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd28P31041 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd28P31041 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cd28P31041 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.46■□□□□ 0.39
Cd28P31041 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Cd28P31041 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.46■□□□□ 0.39
Cd28P31041 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.45■□□□□ 0.38
Cd28P31041 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.45■□□□□ 0.38
Cd28P31041 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.45■□□□□ 0.38
Cd28P31041 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd28P31041 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd28P31041 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd28P31041 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms