Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Gm11421-201ENSMUST00000122124 294 ntBASIC19.83■□□□□ 0.77
Nckap1P28660 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.83■□□□□ 0.77
Nckap1P28660 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Nckap1P28660 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.83■□□□□ 0.77
Nckap1P28660 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nckap1P28660 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nckap1P28660 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nckap1P28660 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.82■□□□□ 0.76
Nckap1P28660 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.82■□□□□ 0.76
Nckap1P28660 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.82■□□□□ 0.76
Nckap1P28660 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.82■□□□□ 0.76
Nckap1P28660 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.82■□□□□ 0.76
Nckap1P28660 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nckap1P28660 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nckap1P28660 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nckap1P28660 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nckap1P28660 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nckap1P28660 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.81■□□□□ 0.76
Nckap1P28660 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nckap1P28660 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Nckap1P28660 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.81■□□□□ 0.76
Nckap1P28660 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nckap1P28660 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nckap1P28660 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.81■□□□□ 0.76
Nckap1P28660 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.8■□□□□ 0.76
Nckap1P28660 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Gm42642-201ENSMUST00000200683 355 ntBASIC19.8■□□□□ 0.76
Nckap1P28660 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Nckap1P28660 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nckap1P28660 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nckap1P28660 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.79■□□□□ 0.76
Nckap1P28660 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.79■□□□□ 0.76
Nckap1P28660 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nckap1P28660 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nckap1P28660 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nckap1P28660 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nckap1P28660 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Nckap1P28660 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nckap1P28660 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nckap1P28660 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.78■□□□□ 0.76
Nckap1P28660 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nckap1P28660 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nckap1P28660 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.77■□□□□ 0.76
Nckap1P28660 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Gm42569-201ENSMUST00000200539 472 ntBASIC19.77■□□□□ 0.76
Nckap1P28660 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nckap1P28660 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nckap1P28660 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nckap1P28660 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.76■□□□□ 0.75
Nckap1P28660 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nckap1P28660 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.76■□□□□ 0.75
Nckap1P28660 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nckap1P28660 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nckap1P28660 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.76■□□□□ 0.75
Nckap1P28660 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.75■□□□□ 0.75
Nckap1P28660 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.75■□□□□ 0.75
Nckap1P28660 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.75■□□□□ 0.75
Nckap1P28660 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nckap1P28660 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nckap1P28660 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.74■□□□□ 0.75
Nckap1P28660 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nckap1P28660 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nckap1P28660 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nckap1P28660 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nckap1P28660 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms