Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Col8a2P25318 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.69■□□□□ 0.26
Col8a2P25318 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col8a2P25318 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.69■□□□□ 0.26
Col8a2P25318 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.69■□□□□ 0.26
Col8a2P25318 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Col8a2P25318 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Col8a2P25318 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col8a2P25318 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col8a2P25318 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col8a2P25318 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.67■□□□□ 0.26
Col8a2P25318 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.67■□□□□ 0.26
Col8a2P25318 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.67■□□□□ 0.26
Col8a2P25318 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col8a2P25318 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col8a2P25318 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col8a2P25318 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Col8a2P25318 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col8a2P25318 Gm40848-201ENSMUST00000221998 324 ntBASIC16.66■□□□□ 0.26
Col8a2P25318 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col8a2P25318 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.66■□□□□ 0.26
Col8a2P25318 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col8a2P25318 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col8a2P25318 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.65■□□□□ 0.26
Col8a2P25318 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.65■□□□□ 0.26
Col8a2P25318 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.65■□□□□ 0.26
Col8a2P25318 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col8a2P25318 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col8a2P25318 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col8a2P25318 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col8a2P25318 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col8a2P25318 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col8a2P25318 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col8a2P25318 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col8a2P25318 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.64■□□□□ 0.25
Col8a2P25318 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col8a2P25318 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.64■□□□□ 0.25
Col8a2P25318 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Col8a2P25318 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.64■□□□□ 0.25
Col8a2P25318 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.63■□□□□ 0.25
Col8a2P25318 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Col8a2P25318 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.63■□□□□ 0.25
Col8a2P25318 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col8a2P25318 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col8a2P25318 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Col8a2P25318 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Col8a2P25318 Mir6236-201ENSMUST00000184437 123 ntBASIC16.62■□□□□ 0.25
Col8a2P25318 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.62■□□□□ 0.25
Col8a2P25318 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col8a2P25318 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col8a2P25318 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col8a2P25318 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col8a2P25318 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col8a2P25318 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms