Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rb1P13405 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rb1P13405 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rb1P13405 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rb1P13405 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.17■□□□□ 0.82
Rb1P13405 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rb1P13405 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rb1P13405 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rb1P13405 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Rb1P13405 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.16■□□□□ 0.82
Rb1P13405 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.15■□□□□ 0.82
Rb1P13405 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
Rb1P13405 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.15■□□□□ 0.82
Rb1P13405 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.15■□□□□ 0.82
Rb1P13405 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rb1P13405 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.14■□□□□ 0.81
Rb1P13405 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rb1P13405 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.14■□□□□ 0.81
Rb1P13405 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rb1P13405 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.14■□□□□ 0.81
Rb1P13405 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.13■□□□□ 0.81
Rb1P13405 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.13■□□□□ 0.81
Rb1P13405 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rb1P13405 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rb1P13405 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rb1P13405 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Rb1P13405 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.12■□□□□ 0.81
Rb1P13405 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rb1P13405 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rb1P13405 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rb1P13405 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rb1P13405 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rb1P13405 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
Rb1P13405 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rb1P13405 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Rb1P13405 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rb1P13405 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rb1P13405 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.09■□□□□ 0.81
Rb1P13405 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.09■□□□□ 0.81
Rb1P13405 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rb1P13405 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rb1P13405 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms