Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sod1P08228 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Sod1P08228 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.96■□□□□ 0.63
Sod1P08228 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sod1P08228 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sod1P08228 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Sod1P08228 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sod1P08228 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sod1P08228 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.95■□□□□ 0.62
Sod1P08228 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sod1P08228 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Sod1P08228 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.95■□□□□ 0.62
Sod1P08228 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sod1P08228 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sod1P08228 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.94■□□□□ 0.62
Sod1P08228 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sod1P08228 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Gm27011-201ENSMUST00000182352 972 ntBASIC18.93■□□□□ 0.62
Sod1P08228 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sod1P08228 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sod1P08228 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sod1P08228 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sod1P08228 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sod1P08228 Gm12933-201ENSMUST00000120203 872 ntBASIC18.92■□□□□ 0.62
Sod1P08228 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sod1P08228 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sod1P08228 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.91■□□□□ 0.62
Sod1P08228 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.91■□□□□ 0.62
Sod1P08228 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sod1P08228 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sod1P08228 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sod1P08228 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sod1P08228 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Sod1P08228 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sod1P08228 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Sod1P08228 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sod1P08228 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sod1P08228 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sod1P08228 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sod1P08228 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.89■□□□□ 0.61
Sod1P08228 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.89■□□□□ 0.61
Sod1P08228 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.88■□□□□ 0.61
Sod1P08228 Gm10602-201ENSMUST00000098239 609 ntBASIC18.88■□□□□ 0.61
Sod1P08228 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.88■□□□□ 0.61
Sod1P08228 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sod1P08228 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sod1P08228 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.87■□□□□ 0.61
Sod1P08228 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sod1P08228 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sod1P08228 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Sod1P08228 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sod1P08228 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sod1P08228 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.86■□□□□ 0.61
Sod1P08228 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sod1P08228 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms