Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.99■■□□□ 1.59
Col4a1P02463 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Col4a1P02463 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Col4a1P02463 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col4a1P02463 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Col4a1P02463 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col4a1P02463 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col4a1P02463 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col4a1P02463 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col4a1P02463 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col4a1P02463 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.97■■□□□ 1.59
Col4a1P02463 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Col4a1P02463 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.97■■□□□ 1.59
Col4a1P02463 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col4a1P02463 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.96■■□□□ 1.59
Col4a1P02463 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Col4a1P02463 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col4a1P02463 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Col4a1P02463 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.96■■□□□ 1.59
Col4a1P02463 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Col4a1P02463 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Col4a1P02463 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Col4a1P02463 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.59
Col4a1P02463 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Col4a1P02463 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col4a1P02463 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col4a1P02463 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Col4a1P02463 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Col4a1P02463 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col4a1P02463 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.94■■□□□ 1.58
Col4a1P02463 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col4a1P02463 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC24.94■■□□□ 1.58
Col4a1P02463 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col4a1P02463 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Col4a1P02463 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Col4a1P02463 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.94■■□□□ 1.58
Col4a1P02463 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.94■■□□□ 1.58
Col4a1P02463 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.93■■□□□ 1.58
Col4a1P02463 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.93■■□□□ 1.58
Col4a1P02463 Gm9988-201ENSMUST00000069786 435 ntBASIC24.93■■□□□ 1.58
Col4a1P02463 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Col4a1P02463 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.93■■□□□ 1.58
Col4a1P02463 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col4a1P02463 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.92■■□□□ 1.58
Col4a1P02463 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.92■■□□□ 1.58
Col4a1P02463 Gm27801-201ENSMUST00000184174 223 ntBASIC24.92■■□□□ 1.58
Col4a1P02463 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.92■■□□□ 1.58
Col4a1P02463 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col4a1P02463 Gm13234-201ENSMUST00000120010 747 ntBASIC24.91■■□□□ 1.58
Col4a1P02463 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Col4a1P02463 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.91■■□□□ 1.58
Col4a1P02463 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col4a1P02463 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Col4a1P02463 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col4a1P02463 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col4a1P02463 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col4a1P02463 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col4a1P02463 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.9■■□□□ 1.58
Col4a1P02463 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.9■■□□□ 1.58
Col4a1P02463 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col4a1P02463 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.89■■□□□ 1.58
Col4a1P02463 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col4a1P02463 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Col4a1P02463 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Col4a1P02463 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Col4a1P02463 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.88■■□□□ 1.57
Col4a1P02463 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC24.88■■□□□ 1.57
Col4a1P02463 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC24.88■■□□□ 1.57
Col4a1P02463 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Gm12669-201ENSMUST00000122162 1009 ntBASIC24.88■■□□□ 1.57
Col4a1P02463 Gm42778-201ENSMUST00000199644 553 ntBASIC24.88■■□□□ 1.57
Col4a1P02463 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col4a1P02463 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col4a1P02463 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Col4a1P02463 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col4a1P02463 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.87■■□□□ 1.57
Col4a1P02463 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col4a1P02463 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col4a1P02463 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col4a1P02463 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Col4a1P02463 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms