Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.78■□□□□ 0.92
P01878 Gm42778-201ENSMUST00000199644 553 ntBASIC20.78■□□□□ 0.92
P01878 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P01878 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
P01878 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
P01878 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
P01878 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.77■□□□□ 0.92
P01878 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P01878 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.76■□□□□ 0.91
P01878 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01878 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01878 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01878 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
P01878 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P01878 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.75■□□□□ 0.91
P01878 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01878 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P01878 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.74■□□□□ 0.91
P01878 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.74■□□□□ 0.91
P01878 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
P01878 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
P01878 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.74■□□□□ 0.91
P01878 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P01878 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01878 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
P01878 Gm27801-201ENSMUST00000184174 223 ntBASIC20.73■□□□□ 0.91
P01878 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01878 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
P01878 Gm9988-201ENSMUST00000069786 435 ntBASIC20.73■□□□□ 0.91
P01878 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01878 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.73■□□□□ 0.91
P01878 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01878 Reep4-203ENSMUST00000226563 1444 ntBASIC20.72■□□□□ 0.91
P01878 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
P01878 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.72■□□□□ 0.91
P01878 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.72■□□□□ 0.91
P01878 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01878 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01878 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
P01878 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01878 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
P01878 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
P01878 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.71■□□□□ 0.91
P01878 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P01878 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Gm13234-201ENSMUST00000120010 747 ntBASIC20.7■□□□□ 0.9
P01878 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
P01878 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.7■□□□□ 0.9
P01878 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.7■□□□□ 0.9
P01878 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
P01878 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P01878 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01878 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P01878 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P01878 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P01878 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.69■□□□□ 0.9
P01878 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.69■□□□□ 0.9
P01878 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01878 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.69■□□□□ 0.9
P01878 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01878 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
P01878 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms