Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trove2O08848 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trove2O08848 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.31■□□□□ 0.84
Trove2O08848 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trove2O08848 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trove2O08848 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trove2O08848 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.31■□□□□ 0.84
Trove2O08848 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trove2O08848 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
Trove2O08848 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trove2O08848 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.29■□□□□ 0.84
Trove2O08848 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.29■□□□□ 0.84
Trove2O08848 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trove2O08848 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trove2O08848 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.28■□□□□ 0.84
Trove2O08848 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trove2O08848 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Trove2O08848 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trove2O08848 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Trove2O08848 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trove2O08848 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
Trove2O08848 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trove2O08848 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trove2O08848 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trove2O08848 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trove2O08848 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trove2O08848 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trove2O08848 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.26■□□□□ 0.83
Trove2O08848 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trove2O08848 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trove2O08848 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Trove2O08848 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trove2O08848 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trove2O08848 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trove2O08848 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.26■□□□□ 0.83
Trove2O08848 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.26■□□□□ 0.83
Trove2O08848 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.26■□□□□ 0.83
Trove2O08848 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
Trove2O08848 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Trove2O08848 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.25■□□□□ 0.83
Trove2O08848 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trove2O08848 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trove2O08848 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Trove2O08848 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trove2O08848 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.24■□□□□ 0.83
Trove2O08848 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Trove2O08848 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trove2O08848 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trove2O08848 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trove2O08848 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms