Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.71□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav13d-4A0A0G2JFX3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav13d-4A0A0G2JFX3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13d-4A0A0G2JFX3 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms