Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gm10399-202ENSMUST00000202768 748 ntBASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Cap2-205ENSMUST00000225824 1634 ntBASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-1A0A0G2JEV5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gm43566-201ENSMUST00000196851 808 ntBASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7-1A0A0G2JEV5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7-1A0A0G2JEV5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7-1A0A0G2JEV5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav7-1A0A0G2JEV5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7-1A0A0G2JEV5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav7-1A0A0G2JEV5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7-1A0A0G2JEV5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gm5921-201ENSMUST00000075898 882 ntBASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Trav7-1A0A0G2JEV5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav7-1A0A0G2JEV5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Gm10232-201ENSMUST00000089221 720 ntBASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav7-1A0A0G2JEV5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms