Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13n-1A0A0G2JEU8 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm43530-201ENSMUST00000195920 274 ntBASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Iqck-206ENSMUST00000208658 2891 ntBASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Serp2-204ENSMUST00000228055 705 ntBASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-1A0A0G2JEU8 Mir7075-201ENSMUST00000184187 82 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms