Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-2A0A0G2JDP3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms