Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-47A0A0A6YY41 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-47A0A0A6YY41 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm7143-201ENSMUST00000222811 859 ntBASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm9959-201ENSMUST00000068277 390 ntBASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-47A0A0A6YY41 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-47A0A0A6YY41 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.39■□□□□ 0.21
Ighv1-47A0A0A6YY41 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-47A0A0A6YY41 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ighv1-47A0A0A6YY41 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Rps24-207ENSMUST00000224568 714 ntBASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-47A0A0A6YY41 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms