Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv3-4A0A0A6YXF1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm12933-201ENSMUST00000120203 872 ntBASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv3-4A0A0A6YXF1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms