Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-52A0A0A6YXC3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm43137-201ENSMUST00000198052 594 ntBASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Ighv1-52A0A0A6YXC3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.08■□□□□ 0
Ighv1-52A0A0A6YXC3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-52A0A0A6YXC3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ighv1-52A0A0A6YXC3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms