Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Mir6538-201ENSMUST00000183713 110 ntBASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.16■□□□□ 0.02
Trdv1A0A075B657 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trdv1A0A075B657 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trdv1A0A075B657 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Gm45444-201ENSMUST00000211394 898 ntBASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trdv1A0A075B657 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trdv1A0A075B657 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Gm10399-202ENSMUST00000202768 748 ntBASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trdv1A0A075B657 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trdv1A0A075B657 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms