Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav17A0A075B655 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.8■□□□□ 0.12
Trav17A0A075B655 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav17A0A075B655 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav17A0A075B655 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.8■□□□□ 0.12
Trav17A0A075B655 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.79■□□□□ 0.12
Trav17A0A075B655 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav17A0A075B655 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.78■□□□□ 0.12
Trav17A0A075B655 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav17A0A075B655 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav17A0A075B655 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav17A0A075B655 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav17A0A075B655 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.76■□□□□ 0.11
Trav17A0A075B655 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav17A0A075B655 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.76■□□□□ 0.11
Trav17A0A075B655 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trav17A0A075B655 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav17A0A075B655 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav17A0A075B655 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms