Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ddx49Q4FZF3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm12684-201ENSMUST00000118675 999 ntBASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm44304-201ENSMUST00000200509 145 ntBASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ddx49Q4FZF3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm14633-201ENSMUST00000121152 470 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm18552-201ENSMUST00000187425 538 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm44236-201ENSMUST00000204492 513 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gm8618-201ENSMUST00000097570 432 ntBASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx49Q4FZF3 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms